Publications
2017
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E. Schuettpelz, P.B. Frandsen, R.B. Dikow, A. Brown, S. Orli, M. Peters, A. Metallo, V.A. Funk, L.J. Dorr. (2 November 2017). Applications of deep convolutional neural networks to digitized natural history collections. Biodiversity Data Journal.
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R.B. Dikow, P.B. Frandsen, M. Turcatel, T. Dikow. (31 January 2017) Genomic and transcriptomic resources for assassin flies including the complete genome sequence of Proctacanthus coquilletti (Insecta: Diptera: Asilidae) and 16 representative transcriptomes. PeerJ.
2016
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R. Lanfear, P.B. Frandsen, A. Wright, T. Senfeld, B. Calcott (24 December 2016). PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Molecular Biology and Evolution.
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K.M. Kjer, M. Borowiec, P.B. Frandsen, J. Ware, B. Wiegmann. (31 December 2016). Advances using molecular data in insect systematics. Current Opinion in Insect Science.
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X. Zhou, P.B. Frandsen, R.W. Holzenthal, C.R. Beet, K.R. Bennett, R.J. Blahnik, N. Bonada, D. Cartwright, S. Chuluunbat, G.V. Cocks, G.E. Collins, J. Dean, O.S. Flint, A. Hausmann, L. Hendrich, M. Hess, I.D. Hogg, B.C. Kondratieff, H. Malicky, M.A. Milton, J. Morinière, J.C. Morse, F.N. Mwangi, S.U. Pauls, M.R. Gonzalez, A. Rinne, J.L. Robinson, J. Salokannel, M. Shackleton, B. Smith, A. Stamatakis, R. StClair, J.A. Thomas, C. Zamora-Muñoz, T. Ziesmann, K.M. Kjer. (5 September 2016) The Trichoptera barcode initiative: a strategy for generating a species-level Tree of Life. Philosophical Transactions of the Royal Society B.
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K.M. Kjer, J.A. Thomas, X. Zhou, P.B. Frandsen, E. Prendini, R.W. Holzenthal. (9 August 2016) Progress on the phylogeny of caddisflies (Trichoptera). Zoosymposia.
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P.B. Frandsen, X. Zhou, O. Flint Jr., K.M. Kjer. (9 August 2016) Using DNA barcode data to add leaves to the Trichoptera tree of life. Zoosymposia.
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P.B. Frandsen, R.E. Thomson. (9 August 2016) Collection and preservation of Trichoptera for use in DNA research. Zoosymposia.
2015
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K. M. Kjer, J. L. Ware, J. Rust, T. Wappler, R. Lanfear, L. S. Jermiin, X. Zhou, H. Aspöck, U. Aspöck, R. G. Beutel, A. Blanke, A. Donath, T. Flouri, P. B. Frandsen, P. Kapli, A. Y. Kawahara, H. Letsch, C. Mayer, D. D. McKenna, K. Meusemann, O. Niehuis, R. S. Peters, B. M. Wiegmann, D. K. Yeates, B. M. von Reumont, A. Stamatakis, B. Misof. (31 July 2015) Response to Comment on “Phylogenomics resolves the timing and pattern of insect evolution”. Science.
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P.B. Frandsen, B. Calcott, C. Mayer, R. Lanfear. (10 February 2015) Automatic selection of partitioning schemes for phylogenetic analyses using iterative k-means clustering of site rates. BMC Evolutionary Biology.
2014
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K.M. Kjer, X. Zhou, P.B. Frandsen, J. Thomas, R. Blahnik. (11 December 2014) Building species-level phylogeny using ribosomal DNA and COI barcodes: an example from the diverse caddisfly genus, Chimarra (Insecta: Trichoptera: Philopotamidae). Arthropod Systematics and Phylogeny.
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B. Misof*, S. Liu, K. Meusemann, R. S. Peters, C. Mayer, A. Donath, P. B. Frandsen, J. Ware, R. G. Beutel, O. Niehuis, M. Petersen, 1KITE consortium (including 83 other authors), J. Wang*, K. M. Kjer*, X. Zhou*. (7 November 2014) Phylogenomics resolves timing and pattern of insect evolution. Science.
Note: All listed authors were designated on the paper as “major contributors” *=corresponding authors.
2013
- T.S. Vshivkova, O.S. Flint, R.W. Holzenthal, K.M Kjer, P.B. Frandsen, R.E. Thomson, A.B. Egorov. (January 2013) First data on Trichoptera fauna (Insecta) of streams and ponds of Vostok Bay Basin (Peter the Great Bay, Primorye Territory). Chapter in FRESHWATER LIFE, Publisher: Dalnauka, Editors: Makarchenko E.A.